Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, rnd family, mfp subunit | HMPREF1534_00656 | Not Available | Positive | 782663 - 783751 | 40035.0 |
| hypothetical protein | HMPREF1534_00657 | Not Available | Positive | 783770 - 786817 | 112399.0 |
| hypothetical protein | HMPREF1534_00658 | Not Available | Positive | 786817 - 788109 | 48421.8 |
| hypothetical protein | HMPREF1534_00659 | Not Available | Positive | 788250 - 789395 | 43930.2 |
| hypothetical protein | HMPREF1534_00660 | Not Available | Positive | 789382 - 791085 | 65307.9 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | HMPREF1534_00661 | Not Available | Negative | 791195 - 792481 | 46568.0 |
| hypothetical protein | HMPREF1534_00662 | Not Available | Positive | 792659 - 793120 | 17530.3 |
| hypothetical protein | HMPREF1534_00663 | Not Available | Negative | 793246 - 796506 | 122876.0 |
| hypothetical protein | HMPREF1534_00664 | Not Available | Negative | 796544 - 796810 | 10131.5 |
| hypothetical protein | HMPREF1534_00665 | Not Available | Negative | 796813 - 797169 | 13424.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


