Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00646 | Not Available | Negative | 774655 - 775434 | 28894.0 |
| anthranilate phosphoribosyltransferase | HMPREF1534_00647 | Not Available | Negative | 775458 - 776453 | 36490.2 |
| hypothetical protein | HMPREF1534_00648 | Not Available | Negative | 776472 - 777035 | 20892.3 |
| hypothetical protein | HMPREF1534_00649 | Not Available | Negative | 777050 - 778450 | 52886.5 |
| tryptophan synthase beta chain | HMPREF1534_00650 | Not Available | Negative | 778447 - 779643 | 43947.8 |
| hypothetical protein | HMPREF1534_00651 | Not Available | Negative | 779897 - 780157 | 9511.27 |
| hypothetical protein | HMPREF1534_00652 | Not Available | Positive | 780254 - 780397 | 5522.73 |
| hypothetical protein | HMPREF1534_00653 | Not Available | Positive | 780490 - 781056 | 20307.9 |
| hypothetical protein | HMPREF1534_00654 | Not Available | Positive | 781064 - 781459 | 14754.2 |
| hypothetical protein | HMPREF1534_00655 | Not Available | Negative | 781683 - 782564 | 33975.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


