Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00626 | Not Available | Negative | 754028 - 754729 | 25285.6 |
| hypothetical protein | HMPREF1534_00627 | Not Available | Positive | 754967 - 755479 | 19909.4 |
| hypothetical protein | HMPREF1534_00628 | Not Available | Positive | 755641 - 756390 | 27928.7 |
| hypothetical protein | HMPREF1534_00629 | Not Available | Positive | 756499 - 757068 | 21038.1 |
| ssra-binding protein | HMPREF1534_00630 | Not Available | Positive | 757068 - 757520 | 17614.5 |
| methionine synthase | HMPREF1534_00631 | Not Available | Positive | 757533 - 760268 | 100022.0 |
| hypothetical protein | HMPREF1534_00632 | Not Available | Negative | 760510 - 761259 | 28003.1 |
| hypothetical protein | HMPREF1534_00633 | Not Available | Negative | 761256 - 762686 | 55456.0 |
| rne/rng family ribonuclease | HMPREF1534_00634 | Not Available | Negative | 762772 - 764346 | 59657.7 |
| hypothetical protein | HMPREF1534_00635 | Not Available | Negative | 764584 - 764859 | 10212.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


