Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00596 | Not Available | Negative | 731690 - 733603 | 73948.3 |
| hypothetical protein | HMPREF1534_00597 | Not Available | Negative | 733996 - 734667 | 25619.3 |
| hypothetical protein | HMPREF1534_00598 | Not Available | Negative | 734694 - 735590 | 34566.1 |
| hypothetical protein | HMPREF1534_00599 | Not Available | Negative | 735590 - 735781 | 7316.14 |
| hypothetical protein | HMPREF1534_00600 | Not Available | Negative | 735730 - 736188 | 17570.4 |
| hypothetical protein | HMPREF1534_00601 | Not Available | Negative | 736197 - 736901 | 27099.1 |
| hypothetical protein | HMPREF1534_00602 | Not Available | Negative | 736922 - 737356 | 16741.3 |
| hypothetical protein | HMPREF1534_00603 | Not Available | Negative | 737353 - 737706 | 13172.0 |
| hypothetical protein | HMPREF1534_00604 | Not Available | Negative | 737837 - 740170 | 88590.7 |
| hypothetical protein | HMPREF1534_00605 | Not Available | Negative | 740183 - 741292 | 42023.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


