Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00586 | Not Available | Negative | 721393 - 721536 | 5269.19 |
| hypothetical protein | HMPREF1534_00587 | Not Available | Negative | 721581 - 722768 | 45397.9 |
| hypothetical protein | HMPREF1534_00588 | Not Available | Negative | 722892 - 723221 | 11939.9 |
| hypothetical protein | HMPREF1534_00589 | Not Available | Negative | 724927 - 725226 | 11649.9 |
| hypothetical protein | HMPREF1534_00590 | Not Available | Positive | 725516 - 727063 | 60056.8 |
| hypothetical protein | HMPREF1534_00591 | Not Available | Positive | 727303 - 728154 | 31808.3 |
| hypothetical protein | HMPREF1534_00592 | Not Available | Positive | 728174 - 728542 | 14084.1 |
| hypothetical protein | HMPREF1534_00593 | Not Available | Positive | 728544 - 728888 | 13555.6 |
| hypothetical protein | HMPREF1534_00594 | Not Available | Positive | 728977 - 730758 | 68575.3 |
| hypothetical protein | HMPREF1534_00595 | Not Available | Positive | 730897 - 731433 | 20401.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


