Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00576 | Not Available | Positive | 708948 - 709949 | 37345.1 |
| hypothetical protein | HMPREF1534_00577 | Not Available | Negative | 709971 - 711140 | 45742.4 |
| hypothetical protein | HMPREF1534_00578 | Not Available | Positive | 711222 - 711611 | 14627.5 |
| hypothetical protein | HMPREF1534_00579 | Not Available | Negative | 711613 - 712788 | 42425.3 |
| hypothetical protein | HMPREF1534_00580 | Not Available | Positive | 712809 - 713372 | 20872.0 |
| hypothetical protein | HMPREF1534_00581 | Not Available | Negative | 713392 - 714549 | 43409.9 |
| hypothetical protein | HMPREF1534_00582 | Not Available | Negative | 714718 - 718740 | 151120.0 |
| hypothetical protein | HMPREF1534_00583 | Not Available | Negative | 719126 - 719488 | 14048.3 |
| hypothetical protein | HMPREF1534_00584 | Not Available | Negative | 719755 - 719898 | 5193.21 |
| hypothetical protein | HMPREF1534_00585 | Not Available | Negative | 719949 - 721271 | 49559.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


