Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00526 | Not Available | Negative | 652694 - 654382 | 65073.2 |
| hypothetical protein | HMPREF1534_00527 | Not Available | Negative | 654747 - 656816 | 78060.2 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1534_00528 | Not Available | Negative | 656829 - 660023 | 118358.0 |
| hypothetical protein | HMPREF1534_00529 | Not Available | Positive | 660463 - 660573 | 4150.18 |
| hypothetical protein | HMPREF1534_00530 | Not Available | Negative | 660956 - 661123 | 6477.68 |
| hypothetical protein | HMPREF1534_00531 | Not Available | Negative | 661128 - 661403 | 10675.4 |
| hypothetical protein | HMPREF1534_00532 | Not Available | Negative | 661400 - 663409 | 76718.0 |
| hypothetical protein | HMPREF1534_00533 | Not Available | Positive | 663967 - 664107 | 5280.77 |
| hypothetical protein | HMPREF1534_00534 | Not Available | Negative | 664148 - 664717 | 20547.8 |
| hypothetical protein | HMPREF1534_00535 | Not Available | Positive | 664746 - 664925 | 7119.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


