Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein reca | HMPREF1534_00516 | Not Available | Positive | 639278 - 640321 | 37301.7 |
| hypothetical protein | HMPREF1534_00517 | Not Available | Negative | 640407 - 641003 | 21208.9 |
| hypothetical protein | HMPREF1534_00518 | Not Available | Positive | 641160 - 642668 | 57264.1 |
| hypothetical protein | HMPREF1534_00519 | Not Available | Negative | 642755 - 643516 | 29749.5 |
| hypothetical protein | HMPREF1534_00520 | Not Available | Negative | 643639 - 645660 | 78973.1 |
| hypothetical protein | HMPREF1534_00521 | Not Available | Negative | 645758 - 648316 | 98280.6 |
| glpgli family protein | HMPREF1534_00522 | Not Available | Negative | 648328 - 649203 | 33194.9 |
| hypothetical protein | HMPREF1534_00523 | Not Available | Positive | 649371 - 650807 | 54039.7 |
| hypothetical protein | HMPREF1534_00524 | Not Available | Positive | 650838 - 651521 | 26145.4 |
| hypothetical protein | HMPREF1534_00525 | Not Available | Positive | 651610 - 652488 | 33746.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


