Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00496 | Not Available | Positive | 613132 - 613760 | 23734.3 |
| hypothetical protein | HMPREF1534_00497 | Not Available | Positive | 613814 - 614245 | 16284.8 |
| hypothetical protein | HMPREF1534_00498 | Not Available | Negative | 614225 - 615634 | 53970.1 |
| hypothetical protein | HMPREF1534_00499 | Not Available | Positive | 615680 - 616486 | 31929.7 |
| hypothetical protein | HMPREF1534_00500 | Not Available | Negative | 616494 - 617879 | 52551.5 |
| hypothetical protein | HMPREF1534_00501 | Not Available | Negative | 618083 - 619108 | 39299.5 |
| hypothetical protein | HMPREF1534_00502 | Not Available | Negative | 619224 - 620597 | 51832.6 |
| excisionase family dna binding domain-containing protein | HMPREF1534_00503 | Not Available | Negative | 620597 - 620956 | 14127.0 |
| hypothetical protein | HMPREF1534_00504 | Not Available | Negative | 621255 - 623603 | 88446.2 |
| hypothetical protein | HMPREF1534_00505 | Not Available | Negative | 623606 - 630514 | 267377.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


