Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00486 | Not Available | Positive | 602914 - 603087 | 6601.87 |
| hypothetical protein | HMPREF1534_00487 | Not Available | Negative | 603121 - 604227 | 42818.0 |
| hypothetical protein | HMPREF1534_00488 | Not Available | Positive | 604654 - 605376 | 27984.9 |
| hypothetical protein | HMPREF1534_00489 | Not Available | Positive | 605528 - 605734 | 7543.02 |
| hypothetical protein | HMPREF1534_00490 | Not Available | Positive | 605747 - 608065 | 88054.5 |
| hypothetical protein | HMPREF1534_00491 | Not Available | Positive | 608068 - 609576 | 57247.0 |
| hypothetical protein | HMPREF1534_00492 | Not Available | Positive | 609592 - 610608 | 39190.5 |
| hypothetical protein | HMPREF1534_00493 | Not Available | Positive | 610601 - 611074 | 17995.3 |
| hypothetical protein | HMPREF1534_00494 | Not Available | Positive | 611087 - 612859 | 67099.4 |
| type-1 restriction enzyme ecoai specificity protein | HMPREF1534_00495 | Not Available | Positive | 612863 - 613131 | 10361.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


