Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00037 | Not Available | - | 46132 - 46347 | 8172.32 |
| yjee family atpase | HMPREF1534_00038 | Not Available | - | 46621 - 47046 | 16110.0 |
| hypothetical protein | HMPREF1534_00039 | Not Available | - | 47076 - 47900 | 30214.2 |
| hypothetical protein | HMPREF1534_00040 | Not Available | - | 47953 - 48372 | 15935.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | HMPREF1534_00041 | Not Available | - | 48377 - 49603 | 45778.1 |
| hypothetical protein | HMPREF1534_00042 | Not Available | - | 49807 - 50859 | 38121.7 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | HMPREF1534_00043 | Not Available | - | 50884 - 51630 | 28864.6 |
| dna polymerase iv | HMPREF1534_00044 | Not Available | - | 51753 - 52850 | 41726.1 |
| hypothetical protein | HMPREF1534_00045 | Not Available | - | 52988 - 54475 | 57436.0 |
| hypothetical protein | HMPREF1534_00046 | Not Available | - | 54555 - 55151 | 23000.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


