Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00416 | Not Available | Negative | 504858 - 505484 | 23626.9 |
| hypothetical protein | HMPREF1534_00417 | Not Available | Negative | 505518 - 506156 | 23803.9 |
| hypothetical protein | HMPREF1534_00418 | Not Available | Negative | 506284 - 506775 | 17177.3 |
| hypothetical protein | HMPREF1534_00419 | Not Available | Negative | 506859 - 508250 | 51780.2 |
| hypothetical protein | HMPREF1534_00420 | Not Available | Negative | 508287 - 509447 | 43803.2 |
| hypothetical protein | HMPREF1534_00421 | Not Available | Positive | 509502 - 510038 | 20243.5 |
| hypothetical protein | HMPREF1534_00422 | Not Available | Positive | 510758 - 513490 | 103153.0 |
| uracil-dna glycosylase | HMPREF1534_00423 | Not Available | Negative | 513499 - 514161 | 24909.5 |
| aspartate-ammonia ligase | HMPREF1534_00424 | Not Available | Negative | 514276 - 515316 | 39865.4 |
| Trna-arg | Not Available | Not Available | Positive | 515518 - 515592 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


