Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00406 | Not Available | Positive | 491962 - 492279 | 11908.9 |
| hypothetical protein | HMPREF1534_00407 | Not Available | Negative | 492842 - 495028 | 82625.6 |
| hypothetical protein | HMPREF1534_00408 | Not Available | Negative | 495028 - 497160 | 79633.9 |
| hypothetical protein | HMPREF1534_00409 | Not Available | Positive | 497383 - 498102 | 26918.9 |
| 1-acylglycerol-3-phosphate o-acyltransferase | HMPREF1534_00410 | Not Available | Negative | 498106 - 498858 | 28205.8 |
| hypothetical protein | HMPREF1534_00411 | Not Available | Negative | 498947 - 499963 | 37978.1 |
| hypothetical protein | HMPREF1534_00412 | Not Available | Positive | 500206 - 501648 | 54914.1 |
| hypothetical protein | HMPREF1534_00413 | Not Available | Negative | 501729 - 502619 | 33637.3 |
| dihydroorotase, multifunctional complex type | HMPREF1534_00414 | Not Available | Negative | 502616 - 503956 | 49405.2 |
| hypothetical protein | HMPREF1534_00415 | Not Available | Negative | 503953 - 504702 | 28788.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


