Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00386 | Not Available | Negative | 470522 - 471703 | 45091.8 |
| transcription-repair coupling factor | HMPREF1534_00387 | Not Available | Positive | 471811 - 475176 | 127215.0 |
| hypothetical protein | HMPREF1534_00388 | Not Available | Positive | 475261 - 476334 | 40896.6 |
| Trna-his | Not Available | Not Available | Positive | 476409 - 476485 | Not Available |
| hypothetical protein | HMPREF1534_00390 | Not Available | Negative | 476726 - 476944 | 8328.54 |
| hypothetical protein | HMPREF1534_00391 | Not Available | Positive | 477040 - 479073 | 76838.8 |
| hypothetical protein | HMPREF1534_00392 | Not Available | Positive | 479084 - 480067 | 37289.7 |
| hypothetical protein | HMPREF1534_00393 | Not Available | Positive | 480051 - 480644 | 22889.5 |
| hypothetical protein | HMPREF1534_00394 | Not Available | Positive | 480736 - 481884 | 43423.5 |
| hypothetical protein | HMPREF1534_00395 | Not Available | Negative | 481881 - 483074 | 43947.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


