Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03983 | Not Available | + | 4527719 - 4529500 | 68575.3 |
| hypothetical protein | HMPREF1534_03984 | Not Available | + | 4529962 - 4531101 | 43930.1 |
| hypothetical protein | HMPREF1534_03985 | Not Available | - | 4531331 - 4532743 | 51775.3 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1534_03986 | Not Available | - | 4532765 - 4535599 | 105287.0 |
| hypothetical protein | HMPREF1534_03987 | Not Available | - | 4536023 - 4536145 | 4805.91 |
| hypothetical protein | HMPREF1534_03988 | Not Available | + | 4536410 - 4536670 | 9958.94 |
| hypothetical protein | HMPREF1534_03989 | Not Available | - | 4536627 - 4537793 | 45437.5 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1534_03990 | Not Available | + | 4538180 - 4541152 | 109822.0 |
| hypothetical protein | HMPREF1534_03991 | Not Available | + | 4541171 - 4542676 | 56545.4 |
| hypothetical protein | HMPREF1534_03992 | Not Available | + | 4543091 - 4543327 | 8409.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


