Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03953 | Not Available | + | 4507525 - 4507779 | 8680.26 |
| hypothetical protein | HMPREF1534_03954 | Not Available | + | 4507859 - 4509016 | 45300.6 |
| hypothetical protein | HMPREF1534_03955 | Not Available | - | 4509006 - 4509113 | 4030.05 |
| hypothetical protein | HMPREF1534_03956 | Not Available | - | 4509104 - 4509259 | 6039.48 |
| hypothetical protein | HMPREF1534_03957 | Not Available | + | 4509299 - 4510381 | 41270.0 |
| hypothetical protein | HMPREF1534_03958 | Not Available | + | 4510434 - 4510937 | 19869.9 |
| hypothetical protein | HMPREF1534_03959 | Not Available | - | 4511101 - 4512093 | 37785.9 |
| hypothetical protein | HMPREF1534_03960 | Not Available | + | 4512291 - 4512518 | 8302.17 |
| hypothetical protein | HMPREF1534_03961 | Not Available | + | 4512519 - 4513385 | 32812.4 |
| hypothetical protein | HMPREF1534_03962 | Not Available | + | 4513574 - 4513708 | 4742.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


