Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03933 | Not Available | + | 4482507 - 4483424 | 33732.3 |
| hypothetical protein | HMPREF1534_03934 | Not Available | + | 4483536 - 4484135 | 22090.5 |
| hypothetical protein | HMPREF1534_03935 | Not Available | + | 4484141 - 4485202 | 38430.4 |
| hypothetical protein | HMPREF1534_03936 | Not Available | - | 4485319 - 4485657 | 13197.5 |
| hypothetical protein | HMPREF1534_03937 | Not Available | - | 4485735 - 4489028 | 122128.0 |
| hypothetical protein | HMPREF1534_03938 | Not Available | + | 4489468 - 4491603 | 74874.3 |
| hypothetical protein | HMPREF1534_03939 | Not Available | - | 4492302 - 4493177 | 33814.6 |
| hypothetical protein | HMPREF1534_03940 | Not Available | + | 4493939 - 4494417 | 16965.7 |
| hypothetical protein | HMPREF1534_03941 | Not Available | + | 4494418 - 4495386 | 33515.2 |
| hypothetical protein | HMPREF1534_03942 | Not Available | - | 4495463 - 4498147 | 95602.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


