Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pp_03832 | HMPREF1534_03903 | Not Available | - | 4453350 - 4454444 | Not Available |
| hypothetical protein | HMPREF1534_03904 | Not Available | - | 4454488 - 4455261 | 28248.1 |
| hypothetical protein | HMPREF1534_03905 | Not Available | + | 4455859 - 4456338 | 18546.4 |
| hypothetical protein | HMPREF1534_03906 | Not Available | + | 4456400 - 4459084 | 95602.0 |
| hypothetical protein | HMPREF1534_03907 | Not Available | - | 4459161 - 4461740 | 88861.0 |
| hypothetical protein | HMPREF1534_03908 | Not Available | - | 4462866 - 4463141 | 10083.0 |
| hypothetical protein | HMPREF1534_03909 | Not Available | + | 4463548 - 4463826 | 10442.7 |
| hypothetical protein | HMPREF1534_03910 | Not Available | + | 4463823 - 4464032 | 7589.93 |
| hypothetical protein | HMPREF1534_03911 | Not Available | + | 4464044 - 4464379 | 13078.8 |
| hypothetical protein | HMPREF1534_03912 | Not Available | + | 4464390 - 4464629 | 9290.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


