Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00376 | Not Available | - | 458014 - 458637 | 23695.0 |
| hypothetical protein | HMPREF1534_00377 | Not Available | + | 458818 - 460434 | 61217.1 |
| hypothetical protein | HMPREF1534_00378 | Not Available | + | 460633 - 460914 | 10704.3 |
| hypothetical protein | HMPREF1534_00379 | Not Available | - | 460998 - 461156 | 5990.16 |
| hypothetical protein | HMPREF1534_00380 | Not Available | - | 461704 - 462006 | 11263.9 |
| hypothetical protein | HMPREF1534_00381 | Not Available | + | 462946 - 463512 | 21906.2 |
| aspartate 4-decarboxylase | HMPREF1534_00382 | Not Available | - | 463963 - 465606 | 62592.1 |
| aspartate-alanine antiporter | HMPREF1534_00383 | Not Available | - | 465628 - 467325 | 60976.4 |
| hypothetical protein | HMPREF1534_00384 | Not Available | + | 467454 - 468275 | 31242.0 |
| hypothetical protein | HMPREF1534_00385 | Not Available | - | 468267 - 470462 | 86731.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


