Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03863 | Not Available | - | 4404310 - 4404807 | 20001.1 |
| hypothetical protein | HMPREF1534_03864 | Not Available | - | 4405514 - 4405924 | 15665.5 |
| hypothetical protein | HMPREF1534_03865 | Not Available | - | 4405872 - 4406108 | 9257.21 |
| hypothetical protein | HMPREF1534_03866 | Not Available | + | 4406759 - 4407256 | 19903.1 |
| hypothetical protein | HMPREF1534_03867 | Not Available | + | 4407301 - 4409994 | 98029.2 |
| hypothetical protein | HMPREF1534_03868 | Not Available | + | 4410038 - 4410145 | 4348.39 |
| hypothetical protein | HMPREF1534_03869 | Not Available | + | 4410168 - 4411130 | 33490.9 |
| hypothetical protein | HMPREF1534_03870 | Not Available | + | 4411207 - 4412343 | 43848.1 |
| hypothetical protein | HMPREF1534_03871 | Not Available | + | 4412388 - 4414265 | 71115.8 |
| phosphopantetheine adenylyltransferase | HMPREF1534_03872 | Not Available | + | 4414348 - 4414722 | 14225.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


