Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03853 | Not Available | - | 4388943 - 4390175 | 43942.1 |
| hypothetical protein | HMPREF1534_03854 | Not Available | - | 4390139 - 4390336 | 7487.07 |
| hypothetical protein | HMPREF1534_03855 | Not Available | - | 4390418 - 4391170 | 27833.5 |
| hypothetical protein | HMPREF1534_03856 | Not Available | - | 4391211 - 4392233 | 38880.9 |
| hypothetical protein | HMPREF1534_03857 | Not Available | + | 4392346 - 4394025 | 64099.4 |
| hypothetical protein | HMPREF1534_03858 | Not Available | + | 4394199 - 4396592 | 90517.9 |
| hypothetical protein | HMPREF1534_03859 | Not Available | + | 4396986 - 4397912 | 35786.8 |
| hypothetical protein | HMPREF1534_03860 | Not Available | - | 4398154 - 4399140 | 36379.1 |
| hypothetical protein | HMPREF1534_03861 | Not Available | - | 4399137 - 4401032 | 73474.8 |
| hypothetical protein | HMPREF1534_03862 | Not Available | - | 4401266 - 4404265 | 107907.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


