Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03843 | Not Available | - | 4376793 - 4377179 | 15013.1 |
| dna polymerase i | HMPREF1534_03844 | Not Available | - | 4377577 - 4380441 | 107953.0 |
| hypothetical protein | HMPREF1534_03845 | Not Available | + | 4380533 - 4381507 | 35987.3 |
| deoxyribose-phosphate aldolase | HMPREF1534_03846 | Not Available | - | 4381608 - 4382549 | 34697.0 |
| hypothetical protein | HMPREF1534_03847 | Not Available | - | 4382556 - 4382876 | 12351.7 |
| d-tyrosyl-trna(tyr) deacylase | HMPREF1534_03848 | Not Available | - | 4382878 - 4383330 | 16590.1 |
| uvrabc system protein c | HMPREF1534_03849 | Not Available | - | 4383389 - 4385212 | 70051.0 |
| adenine phosphoribosyltransferase | HMPREF1534_03850 | Not Available | - | 4385528 - 4386052 | 19144.5 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme mnmg | HMPREF1534_03851 | Not Available | - | 4386111 - 4387982 | 69880.4 |
| ybey/upf0054 family metalloprotein | HMPREF1534_03852 | Not Available | - | 4388469 - 4388885 | 15965.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


