Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03783 | Not Available | Positive | 4308214 - 4308348 | 5073.14 |
| nucleoside-triphosphatase | HMPREF1534_03784 | Not Available | Negative | 4308423 - 4309004 | 21542.8 |
| hypothetical protein | HMPREF1534_03785 | Not Available | Positive | 4309505 - 4309888 | 14664.5 |
| hypothetical protein | HMPREF1534_03786 | Not Available | Positive | 4309891 - 4311012 | 42587.6 |
| hypothetical protein | HMPREF1534_03787 | Not Available | Positive | 4311020 - 4312078 | 41454.6 |
| hypothetical protein | HMPREF1534_03788 | Not Available | Positive | 4312109 - 4313245 | 43562.3 |
| hypothetical protein | HMPREF1534_03789 | Not Available | Negative | 4313416 - 4313547 | 4989.1 |
| hypothetical protein | HMPREF1534_03790 | Not Available | Positive | 4313655 - 4314539 | 32986.7 |
| hypothetical protein | HMPREF1534_03791 | Not Available | Negative | 4314555 - 4315451 | 33260.5 |
| leucyl-trna synthetase | HMPREF1534_03792 | Not Available | Negative | 4315458 - 4318292 | 108223.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


