Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03773 | Not Available | Negative | 4297633 - 4297767 | 5226.24 |
| hypothetical protein | HMPREF1534_03774 | Not Available | Positive | 4297893 - 4299200 | 49547.3 |
| hypothetical protein | HMPREF1534_03775 | Not Available | Positive | 4299193 - 4299891 | 26480.0 |
| hypothetical protein | HMPREF1534_03776 | Not Available | Negative | 4300104 - 4301621 | 57552.6 |
| hypothetical protein | HMPREF1534_03777 | Not Available | Negative | 4301721 - 4302533 | 30605.8 |
| hypothetical protein | HMPREF1534_03778 | Not Available | Negative | 4302541 - 4304601 | 80592.3 |
| hypothetical protein | HMPREF1534_03779 | Not Available | Positive | 4304775 - 4305281 | 19548.1 |
| hypothetical protein | HMPREF1534_03780 | Not Available | Negative | 4305310 - 4305852 | 20354.6 |
| quinolinate synthetase complex, a subunit | HMPREF1534_03781 | Not Available | Positive | 4306310 - 4307302 | 36350.9 |
| hypothetical protein | HMPREF1534_03782 | Not Available | Positive | 4307454 - 4308155 | 27072.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


