Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03763 | Not Available | Negative | 4289842 - 4291179 | 50900.9 |
| abc-type bacteriocin transporter | HMPREF1534_03764 | Not Available | Negative | 4291192 - 4293360 | 81096.7 |
| hypothetical protein | HMPREF1534_03765 | Not Available | Negative | 4293374 - 4294540 | 44910.6 |
| hypothetical protein | HMPREF1534_03766 | Not Available | Negative | 4294786 - 4295415 | 24249.0 |
| hypothetical protein | HMPREF1534_03767 | Not Available | Negative | 4295623 - 4296018 | 15181.1 |
| hypothetical protein | HMPREF1534_03768 | Not Available | Negative | 4296078 - 4296233 | 5961.13 |
| hypothetical protein | HMPREF1534_03769 | Not Available | Negative | 4296246 - 4296428 | 6762.97 |
| hypothetical protein | HMPREF1534_03770 | Not Available | Negative | 4296501 - 4296647 | 5605.79 |
| hypothetical protein | HMPREF1534_03771 | Not Available | Negative | 4296669 - 4296797 | 4764.77 |
| hypothetical protein | HMPREF1534_03772 | Not Available | Negative | 4297096 - 4297440 | 13397.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


