Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03713 | Not Available | Positive | 4219196 - 4219312 | 4504.2 |
| hypothetical protein | HMPREF1534_03714 | Not Available | Positive | 4219403 - 4223323 | 150052.0 |
| hypothetical protein | HMPREF1534_03715 | Not Available | Positive | 4223461 - 4225920 | 94038.6 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1534_03716 | Not Available | Positive | 4225953 - 4228928 | 109786.0 |
| hypothetical protein | HMPREF1534_03717 | Not Available | Positive | 4228939 - 4230525 | 59634.2 |
| hypothetical protein | HMPREF1534_03718 | Not Available | Positive | 4230541 - 4232250 | 62105.9 |
| hypothetical protein | HMPREF1534_03719 | Not Available | Positive | 4232258 - 4233301 | 38838.0 |
| hypothetical protein | HMPREF1534_03720 | Not Available | Positive | 4234061 - 4234558 | 19924.2 |
| hypothetical protein | HMPREF1534_03721 | Not Available | Positive | 4234603 - 4237227 | 92927.8 |
| hypothetical protein | HMPREF1534_03722 | Not Available | Positive | 4237541 - 4237696 | 5884.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


