Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03653 | Not Available | Positive | 4145309 - 4145791 | 18350.2 |
| hypothetical protein | HMPREF1534_03654 | Not Available | Positive | 4145849 - 4146109 | 10472.6 |
| acetyl-coa carboxylase, biotin carboxylase subunit | HMPREF1534_03655 | Not Available | Positive | 4146259 - 4147770 | 56995.6 |
| hypothetical protein | HMPREF1534_03656 | Not Available | Positive | 4147788 - 4148303 | 19005.9 |
| hypothetical protein | HMPREF1534_03657 | Not Available | Positive | 4148311 - 4149843 | 55941.1 |
| excisionase family dna binding domain-containing protein | HMPREF1534_03658 | Not Available | Negative | 4150689 - 4151000 | 11696.0 |
| hypothetical protein | HMPREF1534_03659 | Not Available | Negative | 4151009 - 4151473 | 17649.1 |
| hypothetical protein | HMPREF1534_03660 | Not Available | Negative | 4151427 - 4151697 | 10436.6 |
| hypothetical protein | HMPREF1534_03661 | Not Available | Positive | 4151827 - 4152633 | 30488.9 |
| hypothetical protein | HMPREF1534_03662 | Not Available | Positive | 4152640 - 4154715 | 78469.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


