Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00346 | Not Available | + | 424349 - 425977 | 61751.7 |
| hypothetical protein | HMPREF1534_00347 | Not Available | + | 426068 - 427543 | 58058.7 |
| hypothetical protein | HMPREF1534_00348 | Not Available | + | 427555 - 429018 | 56582.8 |
| hypothetical protein | HMPREF1534_00349 | Not Available | + | 429244 - 429612 | 13861.1 |
| ribosomal protein l11 methyltransferase | HMPREF1534_00350 | Not Available | - | 429720 - 430565 | 31626.8 |
| hypothetical protein | HMPREF1534_00351 | Not Available | - | 430576 - 430836 | 10432.5 |
| hypothetical protein | HMPREF1534_00352 | Not Available | + | 431248 - 431871 | 23461.2 |
| hypothetical protein | HMPREF1534_00353 | Not Available | + | 432062 - 433486 | 53393.3 |
| hypothetical protein | HMPREF1534_00354 | Not Available | + | 433536 - 435116 | 58457.0 |
| hypothetical protein | HMPREF1534_00355 | Not Available | - | 435386 - 436519 | 43765.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


