Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03563 | Not Available | Negative | 4051496 - 4051672 | 6580.71 |
| hypothetical protein | HMPREF1534_03564 | Not Available | Negative | 4051692 - 4051985 | 11483.3 |
| hypothetical protein | HMPREF1534_03565 | Not Available | Negative | 4052913 - 4054235 | 49844.2 |
| hypothetical protein | HMPREF1534_03566 | Not Available | Negative | 4054228 - 4056546 | 88312.6 |
| tetracycline resistance protein tetq | HMPREF1534_03567 | Not Available | Negative | 4056546 - 4058471 | 72110.5 |
| hypothetical protein | HMPREF1534_03568 | Not Available | Negative | 4058728 - 4059585 | 32305.7 |
| hypothetical protein | HMPREF1534_03569 | Not Available | Negative | 4059597 - 4059974 | 14253.0 |
| hypothetical protein | HMPREF1534_03570 | Not Available | Negative | 4060559 - 4066402 | 220308.0 |
| hypothetical protein | HMPREF1534_03571 | Not Available | Negative | 4066392 - 4066844 | 17408.3 |
| dna topoisomerase iii | HMPREF1534_03572 | Not Available | Negative | 4067008 - 4069098 | 77488.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


