Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03553 | Not Available | Negative | 4045823 - 4046413 | 22193.2 |
| hypothetical protein | HMPREF1534_03554 | Not Available | Negative | 4046404 - 4046805 | 15782.2 |
| hypothetical protein | HMPREF1534_03555 | Not Available | Negative | 4046802 - 4047248 | 17385.0 |
| hypothetical protein | HMPREF1534_03556 | Not Available | Negative | 4047276 - 4048325 | 40359.8 |
| hypothetical protein | HMPREF1534_03557 | Not Available | Positive | 4048564 - 4049175 | 23261.2 |
| hypothetical protein | HMPREF1534_03558 | Not Available | Positive | 4049279 - 4049383 | 3769.8 |
| hypothetical protein | HMPREF1534_03559 | Not Available | Positive | 4049451 - 4049732 | 10352.8 |
| single-stranded dna-binding protein | HMPREF1534_03560 | Not Available | Negative | 4049820 - 4050200 | 14331.1 |
| hypothetical protein | HMPREF1534_03561 | Not Available | Negative | 4050884 - 4051141 | 10309.4 |
| hypothetical protein | HMPREF1534_03562 | Not Available | Negative | 4051125 - 4051484 | 14273.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


