Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03543 | Not Available | Positive | 4034653 - 4035732 | 41298.9 |
| hypothetical protein | HMPREF1534_03544 | Not Available | Positive | 4035786 - 4036229 | 16964.1 |
| hypothetical protein | HMPREF1534_03545 | Not Available | Positive | 4036226 - 4038304 | 78679.2 |
| hypothetical protein | HMPREF1534_03546 | Not Available | Positive | 4038309 - 4039448 | 41724.7 |
| hypothetical protein | HMPREF1534_03547 | Not Available | Positive | 4039449 - 4040429 | 33940.3 |
| hypothetical protein | HMPREF1534_03548 | Not Available | Positive | 4040426 - 4041184 | 28197.4 |
| hypothetical protein | HMPREF1534_03549 | Not Available | Positive | 4041181 - 4041777 | 23117.6 |
| hypothetical protein | HMPREF1534_03550 | Not Available | Negative | 4041858 - 4043258 | 51814.4 |
| hypothetical protein | HMPREF1534_03551 | Not Available | Negative | 4043313 - 4044743 | 54059.1 |
| hypothetical protein | HMPREF1534_03552 | Not Available | Negative | 4044988 - 4045833 | 31432.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


