Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03513 | Not Available | Negative | 3999718 - 4004691 | 188770.0 |
| hypothetical protein | HMPREF1534_03514 | Not Available | Negative | 4005280 - 4005912 | 24174.7 |
| hypothetical protein | HMPREF1534_03515 | Not Available | Negative | 4005970 - 4006194 | 8479.28 |
| hypothetical protein | HMPREF1534_03516 | Not Available | Positive | 4006675 - 4007397 | 28019.7 |
| hypothetical protein | HMPREF1534_03517 | Not Available | Positive | 4007394 - 4008467 | 40593.0 |
| hypothetical protein | HMPREF1534_03518 | Not Available | Positive | 4008464 - 4009198 | 27358.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | HMPREF1534_03519 | Not Available | Positive | 4009232 - 4009750 | 19203.1 |
| hypothetical protein | HMPREF1534_03520 | Not Available | Negative | 4009899 - 4010552 | 24133.3 |
| hypothetical protein | HMPREF1534_03521 | Not Available | Positive | 4010772 - 4011530 | 28629.0 |
| hypothetical protein | HMPREF1534_03522 | Not Available | Positive | 4011549 - 4011773 | 8497.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


