Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03503 | Not Available | Positive | 3989887 - 3990621 | 28444.5 |
| hypothetical protein | HMPREF1534_03504 | Not Available | Positive | 3990625 - 3992811 | 83158.4 |
| hypothetical protein | HMPREF1534_03505 | Not Available | Negative | 3992919 - 3994133 | 46549.7 |
| hypothetical protein | HMPREF1534_03506 | Not Available | Positive | 3994189 - 3994476 | 10595.9 |
| hypothetical protein | HMPREF1534_03507 | Not Available | Negative | 3994775 - 3995149 | 13887.7 |
| hypothetical protein | HMPREF1534_03508 | Not Available | Negative | 3995183 - 3995455 | 10336.0 |
| hypothetical protein | HMPREF1534_03509 | Not Available | Negative | 3995463 - 3995738 | 10767.8 |
| parb-like partition protein | HMPREF1534_03510 | Not Available | Negative | 3996183 - 3997910 | 65629.1 |
| hypothetical protein | HMPREF1534_03511 | Not Available | Negative | 3998341 - 3998595 | 9476.59 |
| hypothetical protein | HMPREF1534_03512 | Not Available | Negative | 3998603 - 3999358 | 27524.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


