Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03483 | Not Available | Positive | 3971988 - 3973088 | 41443.8 |
| hypothetical protein | HMPREF1534_03484 | Not Available | Positive | 3973192 - 3974079 | 33987.7 |
| hypothetical protein | HMPREF1534_03485 | Not Available | Positive | 3974231 - 3974770 | 20545.2 |
| hypothetical protein | HMPREF1534_03486 | Not Available | Negative | 3974793 - 3975137 | 13001.3 |
| hypothetical protein | HMPREF1534_03487 | Not Available | Positive | 3975153 - 3975530 | 13285.8 |
| hypothetical protein | HMPREF1534_03488 | Not Available | Positive | 3975546 - 3975842 | 10816.6 |
| hypothetical protein | HMPREF1534_03489 | Not Available | Positive | 3975954 - 3978662 | 103966.0 |
| hypothetical protein | HMPREF1534_03490 | Not Available | Positive | 3978674 - 3981220 | 95745.4 |
| hypothetical protein | HMPREF1534_03491 | Not Available | Positive | 3981217 - 3981942 | 27895.7 |
| hypothetical protein | HMPREF1534_03492 | Not Available | Positive | 3981961 - 3982728 | 28600.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


