Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03473 | Not Available | Positive | 3960593 - 3962602 | 76696.0 |
| hypothetical protein | HMPREF1534_03474 | Not Available | Negative | 3962747 - 3964528 | 67997.1 |
| hypothetical protein | HMPREF1534_03475 | Not Available | Negative | 3964533 - 3966314 | 67992.7 |
| hypothetical protein | HMPREF1534_03476 | Not Available | Negative | 3966334 - 3967464 | 43311.3 |
| hypothetical protein | HMPREF1534_03477 | Not Available | Negative | 3967764 - 3968381 | 23912.9 |
| hypothetical protein | HMPREF1534_03478 | Not Available | Negative | 3968592 - 3969005 | 15677.1 |
| hypothetical protein | HMPREF1534_03479 | Not Available | Positive | 3969386 - 3970531 | 44030.6 |
| hypothetical protein | HMPREF1534_03480 | Not Available | Positive | 3970543 - 3970668 | 4807.86 |
| hypothetical protein | HMPREF1534_03481 | Not Available | Negative | 3970755 - 3971135 | 14338.6 |
| excisionase family dna binding domain-containing protein | HMPREF1534_03482 | Not Available | Positive | 3971636 - 3972010 | 14454.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


