Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03463 | Not Available | Negative | 3952116 - 3952496 | 14319.4 |
| trag family conjugation system atpase | HMPREF1534_03464 | Not Available | Negative | 3952526 - 3955036 | 96539.8 |
| hypothetical protein | HMPREF1534_03465 | Not Available | Negative | 3955033 - 3955365 | 12644.8 |
| hypothetical protein | HMPREF1534_03466 | Not Available | Negative | 3955377 - 3955688 | 10668.0 |
| hypothetical protein | HMPREF1534_03467 | Not Available | Negative | 3955891 - 3956619 | 27041.8 |
| hypothetical protein | HMPREF1534_03468 | Not Available | Negative | 3956641 - 3956988 | 13276.9 |
| hypothetical protein | HMPREF1534_03469 | Not Available | Negative | 3956991 - 3957431 | 16963.1 |
| hypothetical protein | HMPREF1534_03470 | Not Available | Negative | 3957434 - 3958195 | 28232.1 |
| hypothetical protein | HMPREF1534_03471 | Not Available | Positive | 3958906 - 3959331 | 16812.4 |
| hypothetical protein | HMPREF1534_03472 | Not Available | Positive | 3959310 - 3960560 | 47050.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


