Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03443 | Not Available | Positive | 3938858 - 3939280 | 16228.0 |
| hypothetical protein | HMPREF1534_03444 | Not Available | Positive | 3939283 - 3940572 | 50042.1 |
| hypothetical protein | HMPREF1534_03445 | Not Available | Positive | 3940597 - 3940854 | 10316.5 |
| hypothetical protein | HMPREF1534_03446 | Not Available | Positive | 3940875 - 3941108 | 9045.67 |
| hypothetical protein | HMPREF1534_03447 | Not Available | Positive | 3941105 - 3941350 | 9264.99 |
| hypothetical protein | HMPREF1534_03448 | Not Available | Positive | 3941396 - 3941704 | 11864.5 |
| hypothetical protein | HMPREF1534_03449 | Not Available | Positive | 3941822 - 3942043 | 8186.02 |
| hypothetical protein | HMPREF1534_03450 | Not Available | Positive | 3942059 - 3942601 | 20628.5 |
| hypothetical protein | HMPREF1534_03451 | Not Available | Negative | 3942631 - 3943134 | 19321.0 |
| hypothetical protein | HMPREF1534_03452 | Not Available | Negative | 3943131 - 3944042 | 33953.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


