Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03423 | Not Available | Positive | 3911379 - 3912365 | 38132.5 |
| cysteinyl-trna synthetase | HMPREF1534_03424 | Not Available | Positive | 3912694 - 3914175 | 56363.1 |
| hypothetical protein | HMPREF1534_03425 | Not Available | Negative | 3914360 - 3916525 | 83326.5 |
| hypothetical protein | HMPREF1534_03426 | Not Available | Positive | 3916745 - 3916840 | 3729.6 |
| hypothetical protein | HMPREF1534_03427 | Not Available | Positive | 3916840 - 3917664 | 30790.1 |
| hypothetical protein | HMPREF1534_03428 | Not Available | Negative | 3917750 - 3918562 | 31234.0 |
| hypothetical protein | HMPREF1534_03429 | Not Available | Negative | 3918559 - 3920445 | 72027.5 |
| hypothetical protein | HMPREF1534_03430 | Not Available | Negative | 3920486 - 3921991 | 57203.7 |
| 6-phosphofructokinase 3 | HMPREF1534_03431 | Not Available | Positive | 3922138 - 3923148 | 35785.3 |
| hypothetical protein | HMPREF1534_03432 | Not Available | Negative | 3923145 - 3927233 | 155538.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


