Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| v-type h(+)-translocating pyrophosphatase | HMPREF1534_00326 | Not Available | - | 398025 - 400229 | 77272.1 |
| hypothetical protein | HMPREF1534_00327 | Not Available | - | 400488 - 402425 | 73829.1 |
| hypothetical protein | HMPREF1534_00328 | Not Available | - | 402397 - 402729 | 12790.2 |
| hypothetical protein | HMPREF1534_00329 | Not Available | - | 402818 - 405289 | 90644.3 |
| hypothetical protein | HMPREF1534_00330 | Not Available | - | 405301 - 405425 | 4691.76 |
| hypothetical protein | HMPREF1534_00331 | Not Available | - | 405465 - 405929 | 18047.6 |
| hypothetical protein | HMPREF1534_00332 | Not Available | - | 406505 - 407062 | 21353.4 |
| hypothetical protein | HMPREF1534_00333 | Not Available | - | 407077 - 407325 | 9333.44 |
| diphosphate-fructose-6-phosphate 1-phosphotransferase | HMPREF1534_00334 | Not Available | + | 407477 - 409120 | 59729.8 |
| hypothetical protein | HMPREF1534_00335 | Not Available | + | 409243 - 410130 | 34717.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


