Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03383 | Not Available | Negative | 3865530 - 3865823 | 10705.9 |
| hypothetical protein | HMPREF1534_03384 | Not Available | Negative | 3865854 - 3866132 | 10238.4 |
| hypothetical protein | HMPREF1534_03385 | Not Available | Negative | 3866138 - 3866374 | 8713.36 |
| hypothetical protein | HMPREF1534_03386 | Not Available | Negative | 3866396 - 3867043 | 24866.9 |
| hypothetical protein | HMPREF1534_03387 | Not Available | Negative | 3867046 - 3867402 | 13696.3 |
| hypothetical protein | HMPREF1534_03388 | Not Available | Negative | 3867439 - 3868308 | 32857.4 |
| hypothetical protein | HMPREF1534_03389 | Not Available | Negative | 3868339 - 3870396 | 80185.9 |
| hypothetical protein | HMPREF1534_03390 | Not Available | Negative | 3870412 - 3870633 | 8483.74 |
| hypothetical protein | HMPREF1534_03391 | Not Available | Negative | 3870623 - 3870823 | 7288.92 |
| Trna-undet | Not Available | Not Available | Positive | 3870849 - 3870934 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


