Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03353 | Not Available | Negative | 3833249 - 3834553 | 50442.9 |
| hypothetical protein | HMPREF1534_03354 | Not Available | Negative | 3834932 - 3835072 | 5143.18 |
| hypothetical protein | HMPREF1534_03355 | Not Available | Negative | 3835069 - 3841788 | 242832.0 |
| hypothetical protein | HMPREF1534_03356 | Not Available | Negative | 3841802 - 3842107 | 11098.4 |
| hypothetical protein | HMPREF1534_03357 | Not Available | Negative | 3842119 - 3845853 | 138929.0 |
| hypothetical protein | HMPREF1534_03358 | Not Available | Negative | 3845900 - 3846364 | 17566.3 |
| tape measure domain-containing protein | HMPREF1534_03359 | Not Available | Negative | 3846366 - 3850757 | 162886.0 |
| hypothetical protein | HMPREF1534_03360 | Not Available | Negative | 3850997 - 3851488 | 18742.3 |
| hypothetical protein | HMPREF1534_03361 | Not Available | Negative | 3851492 - 3852052 | 19932.6 |
| hypothetical protein | HMPREF1534_03362 | Not Available | Negative | 3852064 - 3852411 | 12500.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


