Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03343 | Not Available | Negative | 3820639 - 3822357 | 62665.8 |
| hypothetical protein | HMPREF1534_03344 | Not Available | Negative | 3822805 - 3823701 | 34528.4 |
| hypothetical protein | HMPREF1534_03345 | Not Available | Negative | 3824513 - 3825976 | 54598.2 |
| hypothetical protein | HMPREF1534_03346 | Not Available | Negative | 3825990 - 3826565 | 21854.8 |
| hypothetical protein | HMPREF1534_03347 | Not Available | Positive | 3826982 - 3827587 | 22472.4 |
| hypothetical protein | HMPREF1534_03348 | Not Available | Positive | 3827986 - 3830496 | 95598.5 |
| hypothetical protein | HMPREF1534_03349 | Not Available | Negative | 3830678 - 3831532 | 32802.6 |
| hypothetical protein | HMPREF1534_03350 | Not Available | Negative | 3831628 - 3832272 | 24410.4 |
| hypothetical protein | HMPREF1534_03351 | Not Available | Negative | 3832345 - 3832587 | 9290.32 |
| hypothetical protein | HMPREF1534_03352 | Not Available | Negative | 3832767 - 3833252 | 18871.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


