Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03333 | Not Available | Positive | 3809619 - 3811799 | 83524.1 |
| 30s ribosomal protein s15 | HMPREF1534_03334 | Not Available | Negative | 3811877 - 3812146 | 10365.5 |
| hypothetical protein | HMPREF1534_03335 | Not Available | Positive | 3812609 - 3813148 | 20279.2 |
| hypothetical protein | HMPREF1534_03336 | Not Available | Positive | 3813148 - 3813681 | 20609.1 |
| hypothetical protein | HMPREF1534_03337 | Not Available | Negative | 3813682 - 3814626 | 36093.3 |
| hypothetical protein | HMPREF1534_03338 | Not Available | Negative | 3814702 - 3815022 | 12439.9 |
| hypothetical protein | HMPREF1534_03339 | Not Available | Negative | 3815037 - 3815306 | 10353.5 |
| hypothetical protein | HMPREF1534_03340 | Not Available | Negative | 3815331 - 3818336 | 113913.0 |
| hypothetical protein | HMPREF1534_03341 | Not Available | Negative | 3818354 - 3819448 | 39995.0 |
| hypothetical protein | HMPREF1534_03342 | Not Available | Negative | 3819479 - 3820540 | 39420.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


