Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03313 | Not Available | Positive | 3780557 - 3781717 | 44856.1 |
| hypothetical protein | HMPREF1534_03314 | Not Available | Positive | 3781719 - 3783230 | 57673.9 |
| hypothetical protein | HMPREF1534_03315 | Not Available | Positive | 3783641 - 3784021 | 14371.3 |
| methionyl-trna synthetase | HMPREF1534_03316 | Not Available | Positive | 3785057 - 3787099 | 77547.6 |
| hypothetical protein | HMPREF1534_03317 | Not Available | Positive | 3787247 - 3788686 | 54086.0 |
| hypothetical protein | HMPREF1534_03318 | Not Available | Positive | 3788752 - 3789729 | 38972.8 |
| hypothetical protein | HMPREF1534_03319 | Not Available | Positive | 3789722 - 3790390 | 25139.7 |
| hypothetical protein | HMPREF1534_03320 | Not Available | Positive | 3790377 - 3791474 | 43281.4 |
| hypothetical protein | HMPREF1534_03321 | Not Available | Positive | 3791482 - 3792597 | 42642.8 |
| hypothetical protein | HMPREF1534_03322 | Not Available | Positive | 3792599 - 3793510 | 34569.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


