Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00316 | Not Available | + | 387579 - 388145 | 21328.4 |
| hypothetical protein | HMPREF1534_00317 | Not Available | - | 388205 - 389098 | 34877.8 |
| hypothetical protein | HMPREF1534_00318 | Not Available | + | 389377 - 390399 | 38251.2 |
| hypothetical protein | HMPREF1534_00319 | Not Available | + | 390625 - 391386 | 28666.9 |
| indolepyruvate ferredoxin oxidoreductase, alpha subunit | HMPREF1534_00320 | Not Available | + | 391433 - 393049 | 58493.2 |
| indolepyruvate ferredoxin oxidoreductase, beta subunit | HMPREF1534_00321 | Not Available | + | 393046 - 393627 | 21119.8 |
| hypothetical protein | HMPREF1534_00322 | Not Available | + | 393634 - 394941 | 48517.1 |
| hypothetical protein | HMPREF1534_00323 | Not Available | + | 394981 - 396282 | 48708.8 |
| hypothetical protein | HMPREF1534_00324 | Not Available | + | 396297 - 396713 | 15310.8 |
| hypothetical protein | HMPREF1534_00325 | Not Available | - | 396799 - 397896 | 40051.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


