Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00296 | Not Available | + | 374128 - 374322 | 7486.05 |
| hypothetical protein | HMPREF1534_00297 | Not Available | - | 374412 - 374849 | 16477.8 |
| hypothetical protein | HMPREF1534_00298 | Not Available | - | 374842 - 375087 | 9552.52 |
| hypothetical protein | HMPREF1534_00299 | Not Available | - | 375345 - 375602 | 9778.81 |
| hypothetical protein | HMPREF1534_00300 | Not Available | - | 375801 - 376298 | 18631.8 |
| hypothetical protein | HMPREF1534_00301 | Not Available | - | 376334 - 377038 | 26157.5 |
| hypothetical protein | HMPREF1534_00302 | Not Available | - | 377042 - 377326 | 10891.3 |
| hypothetical protein | HMPREF1534_00303 | Not Available | - | 377494 - 378036 | 20039.9 |
| hypothetical protein | HMPREF1534_00304 | Not Available | - | 378226 - 378393 | 6762.92 |
| excisionase family dna binding domain-containing protein | HMPREF1534_00305 | Not Available | - | 378390 - 378998 | 23068.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


