Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00019 | Not Available | + | 30549 - 31064 | 19450.7 |
| uridylate kinase | HMPREF1534_00020 | Not Available | - | 31214 - 31924 | 25648.3 |
| dna-3-methyladenine glycosylase i | HMPREF1534_00021 | Not Available | + | 31968 - 32609 | 24531.6 |
| 16s ribosomal rna | Not Available | Not Available | + | 33008 - 34525 | Not Available |
| mate efflux family protein | HMPREF1534_00022 | Not Available | - | 32576 - 33910 | 49347.4 |
| biotin-[acetyl-coa-carboxylase] ligase | HMPREF1534_00023 | Not Available | - | 33923 - 34684 | 28939.7 |
| hypothetical protein | HMPREF1534_00024 | Not Available | - | 34668 - 34925 | 10089.1 |
| hypothetical protein | HMPREF1534_00025 | Not Available | - | 35046 - 35411 | 13950.6 |
| hypothetical protein | HMPREF1534_00026 | Not Available | + | 35445 - 35720 | 11079.7 |
| hypothetical protein | HMPREF1534_00027 | Not Available | + | 35729 - 36163 | 15690.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


