Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00267 | Not Available | Negative | 334701 - 335327 | 24355.1 |
| amino acid carrier protein | HMPREF1534_00268 | Not Available | Negative | 335381 - 336781 | 50798.1 |
| hypothetical protein | HMPREF1534_00269 | Not Available | Negative | 336824 - 337534 | 27028.7 |
| hypothetical protein | HMPREF1534_00270 | Not Available | Positive | 337641 - 340910 | 122721.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 340701 - 340810 | Not Available |
| hypothetical protein | HMPREF1534_00271 | Not Available | Positive | 340973 - 341248 | 10360.4 |
| hypothetical protein | HMPREF1534_00272 | Not Available | Negative | 341334 - 342629 | 46365.2 |
| hypothetical protein | HMPREF1534_00273 | Not Available | Negative | 342736 - 344769 | 75116.8 |
| hypothetical protein | HMPREF1534_00274 | Not Available | Negative | 344901 - 346649 | 68232.1 |
| Trna-ser | Not Available | Not Available | Positive | 346886 - 346973 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


