Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00247 | Not Available | - | 309743 - 310744 | 37139.3 |
| hypothetical protein | HMPREF1534_00248 | Not Available | - | 310803 - 311753 | 35761.6 |
| o-glcnacase | HMPREF1534_00249 | Not Available | - | 311768 - 313981 | 84631.3 |
| recq family atp-dependent dna helicase | HMPREF1534_00250 | Not Available | - | 314029 - 315924 | 72869.6 |
| single-stranded-dna-specific exonuclease recj | HMPREF1534_00251 | Not Available | - | 315931 - 317685 | 65751.4 |
| hypothetical protein | HMPREF1534_00252 | Not Available | - | 317827 - 319035 | 45819.1 |
| hypothetical protein | HMPREF1534_00253 | Not Available | - | 319069 - 320460 | 51701.1 |
| hypothetical protein | HMPREF1534_00254 | Not Available | + | 320698 - 322224 | 56836.5 |
| hypothetical protein | HMPREF1534_00255 | Not Available | + | 322315 - 323169 | 33028.1 |
| hypothetical protein | HMPREF1534_00256 | Not Available | + | 323442 - 325247 | 64582.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


