Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00227 | Not Available | + | 286656 - 287315 | 24310.8 |
| hypothetical protein | HMPREF1534_00228 | Not Available | + | 287387 - 287929 | 21307.0 |
| dtdp-4-dehydrorhamnose reductase | HMPREF1534_00229 | Not Available | + | 288130 - 288987 | 32005.1 |
| peptide chain release factor 3 | HMPREF1534_00230 | Not Available | + | 288994 - 290562 | 59983.5 |
| hypothetical protein | HMPREF1534_00231 | Not Available | + | 290968 - 293052 | 79261.0 |
| hypothetical protein | HMPREF1534_00232 | Not Available | + | 293139 - 293501 | 14089.8 |
| tonb family domain-containing protein | HMPREF1534_00233 | Not Available | + | 293519 - 295117 | 60183.8 |
| hypothetical protein | HMPREF1534_00234 | Not Available | + | 295161 - 296513 | 52385.2 |
| hypothetical protein | HMPREF1534_00235 | Not Available | + | 296592 - 297365 | 30327.1 |
| hypothetical protein | HMPREF1534_00236 | Not Available | - | 297715 - 299763 | 78032.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


